The detailed information of tRNA gene sequence


Sequence ID>SRA1016532
Genome IDSRR023846.546420
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 90
End posion on genome 179
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaacctctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGTACCGCACTCGAAATGCGGCGTGCCTTTACGGGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attctaccga
Secondary structure (Cloverleaf model)
>SRA1016532	Ser	CGA
                   c      GCCA attctaccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    T       T T G T
      C G A        A     CGTGCCTTTACGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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