The detailed information of tRNA gene sequence


Sequence ID>SRA1016569
Genome IDSRR027217.2494
Search identical group
Phylum/ClassDiversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
Species
Start position on genome 152
End posion on genome 228
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgcacggtc
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACCTGTTTTGGGTACAGGGGGTCGTGAGTTCGAA
TCTCGCCGCCCCGACCA
Downstream region at tRNA end position 
cttcttcttt
Secondary structure (Cloverleaf model)
>SRA1016569	Pro	TGG
                   c      ACCA cttcttcttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | + | | |     G
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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