The detailed information of tRNA gene sequence


Sequence ID>SRA1016580
Genome IDSRR027355.36724
Search identical group
Phylum/ClassInvestigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)
Species
Start position on genome 19
End posion on genome 106
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgaattcaac
tRNA gene sequence 
GCCGGAGTGGTGAAACTGGTAGACGCGCTGGACTCAAAATCCAGCGGGGGGCAACCCCGT
GTCGGTTCGATTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
ttatttatct
Secondary structure (Cloverleaf model)
>SRA1016580	Leu	CAA
                   c      ACCA ttatttatct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A G C C     A
      C A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     CGGGGGGCAACCCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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