The detailed information of tRNA gene sequence


Sequence ID>SRA1016582
Genome IDSRR027355.49284
Search identical group
Phylum/ClassInvestigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)
Species
Start position on genome 21
End posion on genome 103
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gatcaacgcc
tRNA gene sequence 
GGGCATGTGGCGGAATGGCAGACGCACAGGACTTAAAATCCTGTTCGCTTCGGCGAGTGT
GGGTTCGAGTCCCACCATGCCCAggt
Downstream region at tRNA end position 
tttaaatcct
Secondary structure (Cloverleaf model)
>SRA1016582	Leu	TAA
                   c      Aggt tttaaatcct
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    C       A C G C
      A G          A     TTCGCTTCGGCGAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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