The detailed information of tRNA gene sequence


Sequence ID>SRA1016583
Genome IDSRR027355.52293
Search identical group
Phylum/ClassInvestigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)
Species
Start position on genome 167
End posion on genome 242
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctcttcccgT
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCGCTCGGTTCGGGTCCGAGAAGTCGGAGGTTCAAA
TCCTCCCGCCCCGATgc
Downstream region at tRNA end position 
ttctcccaca
Secondary structure (Cloverleaf model)
>SRA1016583	Pro	CGG
                   T      ATgc ttctcccaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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