The detailed information of tRNA gene sequence


Sequence ID>SRA1016584
Genome IDSRR027355.58354
Search identical group
Phylum/ClassInvestigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)
Species
Start position on genome 164
End posion on genome 245
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cccgcaacat
tRNA gene sequence 
TCCCCAGTTGGTCTGCCGGCAGGGCCCGCCTGACTTTGAATCAGGATTAGCGACGTAGGT
TCGACTCCTACCTGGGGAGCCA
Downstream region at tRNA end position 
tcggtcaaac
Secondary structure (Cloverleaf model)
>SRA1016584	Gln	TTG
                   t      GCCA tcggtcaaac
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T C
                    T     C A T C C     A
    C C G T        T      | | | | |     G
  G         C T G G       G T A G G     C
  G         |   | |                 T T
  C         G C C C
    A G G          G     ATTAGCGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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