The detailed information of tRNA gene sequence


Sequence ID>SRA1016593
Genome IDSRR027365.10272
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 194
End posion on genome 266
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tcgacggctt
tRNA gene sequence 
GCCCGGATAGCTCAGTCGGTAGAGCGTTTCACTCGTAATGAAAAGGTCCCGAGTTCGATT
CTCGGTCCGGGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016593	Thr	CGT
                   t      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     G G C T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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