The detailed information of tRNA gene sequence


Sequence ID>SRA1016605
Genome IDSRR027367.12583
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 122
End posion on genome 47
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccaccttgat
tRNA gene sequence 
GGGGGGTTAGCTCAGTTGGGAGAGCGCCTGAATGGCATTCAGGAGGTCGAGGGTTCAACT
CCCTTACCCTCCACCA
Downstream region at tRNA end position 
tcttttccgg
Secondary structure (Cloverleaf model)
>SRA1016605	Ala	GGC
                   t      ACCA tcttttccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     T T C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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