The detailed information of tRNA gene sequence


Sequence ID>SRA1016620
Genome IDSRR027367.19591
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 67
End posion on genome 143
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gggacatgtg
tRNA gene sequence 
GCGACCGTAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGCGGGTTCGAA
CCCCGTCGGTCGCCCCA
Downstream region at tRNA end position 
tcatccccct
Secondary structure (Cloverleaf model)
>SRA1016620	His	GTG
                   g      CCCA tcatccccct
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          C A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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