The detailed information of tRNA gene sequence


Sequence ID>SRA1016626
Genome IDSRR027368.22838
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 60
End posion on genome 134
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggcatggtaa
tRNA gene sequence 
GCTGCTGTAGCTCAGAGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCGATTC
TCTCCAGCAGCACCA
Downstream region at tRNA end position 
taaaaatcat
Secondary structure (Cloverleaf model)
>SRA1016626	Thr	GGT
                   a      ACCA taaaaatcat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C T C T C     A
        G A        A      | | | | |     G
      A     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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