The detailed information of tRNA gene sequence


Sequence ID>SRA1016634
Genome IDSRR027369.39125
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 262
End posion on genome 174
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cccatcacca
tRNA gene sequence 
GCCCGGGTGGCGAAATTGGCAGACGCGGGGGGCTTAAACCCCCCTTCCACTCACGTGGAG
TGCGGGTTCAAATCCCGCCCCGGGCACCA
Downstream region at tRNA end position 
tcactgagca
Secondary structure (Cloverleaf model)
>SRA1016634	Leu	TAA
                   a      ACCA tcactgagca
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCACTCACGTGGAGT
                    G - C
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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