The detailed information of tRNA gene sequence


Sequence ID>SRA1016635
Genome IDSRR027369.39585
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 75
End posion on genome 162
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaatataatt
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCTTGGAAAGCGTGTAAACGGCAACGTTTC
GAGGGTTCGAATCCCTTCCTCTCTGCGA
Downstream region at tRNA end position 
aaacaaaaag
Secondary structure (Cloverleaf model)
>SRA1016635	Ser	GGA
                   t      GCGA aaacaaaaag
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAACGGCAACGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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