The detailed information of tRNA gene sequence


Sequence ID>SRA1016656
Genome IDSRR027369.51946
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 159
End posion on genome 234
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaatcgtatg
tRNA gene sequence 
GCGGGCGTAGCCAAGTGGTTAAGGCAGTGGATTGTGGTTCCACCATTCGTGGGTTCGAGT
CCCATCGTTCGCCCTA
Downstream region at tRNA end position 
ttcgtaaacc
Secondary structure (Cloverleaf model)
>SRA1016656	His	GTG
                   g      CCTA ttcgtaaacc
                     G - C
                     C - G
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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