The detailed information of tRNA gene sequence


Sequence ID>SRA1016664
Genome IDSRR027475.13428
Search identical group
Phylum/ClassResponse of bacterial communities to in situ carbon pulse label experiments at the Abyssal Seafloor (SRP001228)
Species
Start position on genome 218
End posion on genome 141
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgcccttc
tRNA gene sequence 
GGGCCTGTAGCTCAGCCTGGTTAGAGCGCATCCCTGATAAGGATGAGGTCCCTGGTTCAA
ATCCAGGCAGGCCCACCG
Downstream region at tRNA end position 
gcgaaaaccc
Secondary structure (Cloverleaf model)
>SRA1016664	Ile	GAT
                   c      ACCG gcgaaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G A C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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