The detailed information of tRNA gene sequence


Sequence ID>SRA1016672
Genome IDSRR027678.11361
Search identical group
Phylum/ClassThe LACAr cooperative project: microbial diversity in coastal systems along a latitudinal gradient from South Atlantic to the Caribbean (SRP001244)
Species
Start position on genome 49
End posion on genome 125
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acttcctttt
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGTTAGAGCGCATGCATGACACGCTTGAGGTCGGCAGTTCGAA
TCTGCCATCTCCCACCA
Downstream region at tRNA end position 
ctttttctca
Secondary structure (Cloverleaf model)
>SRA1016672	Val	GAC
                   t      ACCA ctttttctca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A          T A
                    T     C C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T   T
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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