The detailed information of tRNA gene sequence


Sequence ID>SRA1016673
Genome IDSRR028005.16198
Search identical group
Phylum/ClassMicrobial Census of Marine Methane Seeps: Initial Results (SRP001268)
Species
Start position on genome 125
End posion on genome 198
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccgaccacgc
tRNA gene sequence 
GGGGACGTAGCTCAGTTGGGAGAGCACCTGGTTTGCAACCAGGGGGTCGTCGGTTCGAGT
CCGATCGTCTCCACgc
Downstream region at tRNA end position 
ccgtcaccct
Secondary structure (Cloverleaf model)
>SRA1016673	Ala	TGC
                   c      ACgc ccgtcaccct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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