The detailed information of tRNA gene sequence


Sequence ID>SRA1016674
Genome IDSRR028015.17975
Search identical group
Phylum/ClassMicrobial Census of Marine Methane Seeps: Initial Results (SRP001268)
Species
Start position on genome 137
End posion on genome 64
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gagagcaagT
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGAAGAGCGCCGCCTTCGCGAGGCGGAGGCCACGGGTTCAAATC
CCGTCGAGTCCATgt
Downstream region at tRNA end position 
gaaatagcgg
Secondary structure (Cloverleaf model)
>SRA1016674	Ala	CGC
                   T      ATgt gaaatagcgg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      T     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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