The detailed information of tRNA gene sequence


Sequence ID>C153001130
Genome IDCP011409
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum hiltneri N3 [CP011409]
Start position on genome 1586523
End posion on genome 1586601
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtcagactca
tRNA gene sequence 
GGCCCCCTAGCTCATGCTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGTGTTCG
ACTCACGGGGGGGCCACCA
Downstream region at tRNA end position 
gcaatatcaa
Secondary structure (Cloverleaf model)
>C153001130	Met	CAT
                   a      ACCA gcaatatcaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G          T C
                    T     G G C A C     A
    C G T A        A      | | | | |     G
  T         C T C G       C C G T G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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