The detailed information of tRNA gene sequence


Sequence ID>SRA1016839
Genome IDSRR035082.40165
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 380
End posion on genome 307
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaaaatatT
tRNA gene sequence 
GGGGGATTGGTGTAATTGGTAACATATCAACCTTGCAAGTTGAAGTAATAGGTTCAAGTC
CTATATCTTCCATgt
Downstream region at tRNA end position 
aatttttact
Secondary structure (Cloverleaf model)
>SRA1016839	Ala	TGC
                   T      ATgt aatttttact
                     G - C
                     G - C
                     G + T
                     G + T
                     G - C
                     A - T
                     T - A          T G
                    T     T A T C C     A
      T A A        G      | | | | |     A
    T       T G T G       A T A G G     C
    G       | | | +                 T T
    G       A C A T
      T A          A     AGTA
                    T - A
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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