The detailed information of tRNA gene sequence


Sequence ID>C153000825
Genome IDCP010310
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea pulmonicola DSM 16583 [CP010310]
Start position on genome 5723787
End posion on genome 5723709
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcaccatac
tRNA gene sequence 
GGGCCTCTAGCTCATGCCTGGTTAGAGCAGCGAACTCATAATTCGTTGGTGCCGCGTTCG
ACTCGCGGGAGGCCCACCA
Downstream region at tRNA end position 
acccattcgt
Secondary structure (Cloverleaf model)
>C153000825	Met	CAT
                   c      ACCA acccattcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          T C
                    T     G G C G C     A
    C G T A        A      | | | | |     G
  C         C T C G       C C G C G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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