The detailed information of tRNA gene sequence


Sequence ID>SRA1016918
Genome IDSRR035082.53419
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 379
End posion on genome 290
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tttttcgtaT
tRNA gene sequence 
GGAGACGTGCCTGAGTGGCCTAAAGGGCTCGACTTATAATCGATTGATGGCATAGGGTCA
TCCGTGGGTTCGAATCCCACCGTCTCCGTtt
Downstream region at tRNA end position 
gtgagtctgt
Secondary structure (Cloverleaf model)
>SRA1016918	Ile	TAT
                   T      GTtt gtgagtctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    C       A A G G
      C T A        G     TGATGGCATAGGGTCATCC
                    C   T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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