The detailed information of tRNA gene sequence


Sequence ID>C151000566
Genome IDAP012332
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis ATCC 14018 = JCM 11026 [AP012332]
Start position on genome 40739
End posion on genome 40814
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttctccaat
tRNA gene sequence 
GGGGCTATGGCGCAGCTGGTAGCGCATCTGCTTTGCAAGCAGAGGGTCAGGAGTTCGAGT
CTCCTTAGCTCCACAA
Downstream region at tRNA end position 
atagggtttc
Secondary structure (Cloverleaf model)
>C151000566	Ala	TGC
                   t      ACAA atagggtttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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