The detailed information of tRNA gene sequence


Sequence ID>C151000568
Genome IDAP012332
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis ATCC 14018 = JCM 11026 [AP012332]
Start position on genome 257133
End posion on genome 257208
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagttcacct
tRNA gene sequence 
AGGGATGTGGCGCAATTGGTAGCGCAACGGTCTCCAAAACCGTAGGTTGTGGGTTCGAGT
CCCGCCGTCCCTGCCA
Downstream region at tRNA end position 
gttttattgt
Secondary structure (Cloverleaf model)
>C151000568	Trp	CCA
                   t      GCCA gttttattgt
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | + | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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