The detailed information of tRNA gene sequence


Sequence ID>C151000580
Genome IDAP012332
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis ATCC 14018 = JCM 11026 [AP012332]
Start position on genome 1284791
End posion on genome 1284867
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgttagcgt
tRNA gene sequence 
GGGGCTTTAGCTCAGTCGGTTAGAGCAGCGGACTCATAATCCGCCGGTCCAGGGTTCAAG
CCCCTGAGGCCCCACTA
Downstream region at tRNA end position 
gataatcgtc
Secondary structure (Cloverleaf model)
>C151000580	Met	CAT
                   t      ACTA gataatcgtc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A          C G
                    T     G T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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