The detailed information of tRNA gene sequence


Sequence ID>C151000592
Genome IDAP012332
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis ATCC 14018 = JCM 11026 [AP012332]
Start position on genome 1418179
End posion on genome 1418091
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcgcaaaat
tRNA gene sequence 
GGATGAATGTCCGAGCGGTCTAAGGAGCACGCCTCGAAAGCGTGTGAGGGTTACACCCTC
CGCGAGTTCAAATCTCGCTTCATCCGCAA
Downstream region at tRNA end position 
gcagggtttc
Secondary structure (Cloverleaf model)
>C151000592	Ser	CGA
                   t      GCAA gcagggtttc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     A - T          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TGAGGGTTACACCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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