The detailed information of tRNA gene sequence


Sequence ID>SRA1016990
Genome IDSRR035082.65653
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 325
End posion on genome 412
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatatttta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGAACAGTCTTGAAAACTGTCGTGCCTTAACGGGTA
CCGTGGGTTCGAATCCCTCCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016990	Ser	TGA
                   a      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGTGCCTTAACGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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