The detailed information of tRNA gene sequence


Sequence ID>SRA1016991
Genome IDSRR035082.66064
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 105
End posion on genome 195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattattaT
tRNA gene sequence 
CGCTGTGTAGAGTAGTCTGGTCTAACTCAGGGGTCTCATAAGCCCTTTATCCCACAAGGA
TATCGCTGGTTCAAATCCAGCCACAGCTAGta
Downstream region at tRNA end position 
caggagcaac
Secondary structure (Cloverleaf model)
>SRA1016991	Met	CAT
                   T      AGta caggagcaac
                     C   T
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     C G A C C     A
    C T G A        A      | | | | |     A
  T         T G A G       G C T G G     C
  G         | | | |                 T T
  G         A C T C
    T C T A        A     TTATCCCACAAGGATATC
                    G + T
                    G - C
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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