The detailed information of tRNA gene sequence


Sequence ID>C151000962
Genome IDAP012549
Search identical group
Phylum/ClassCyanobacteriota
Speciescyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake [AP012549]
Start position on genome 1988859
End posion on genome 1988786
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctattgtcta
tRNA gene sequence 
CGGGATGTGGCGCAGCTTGGTAGCGCACTTCGTTCGGGACGAAGGGGCCGCTGGTTCGAA
TCCAGTCATCCCGAttt
Downstream region at tRNA end position 
ttcatataca
Secondary structure (Cloverleaf model)
>C151000962	Pro	CGG
                   a      Attt ttcatataca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     G
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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