The detailed information of tRNA gene sequence


Sequence ID>C151001632
Genome IDAP014509
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga caldifontis AZM44c09 [AP014509]
Start position on genome 542318
End posion on genome 542396
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctggaaagtc
tRNA gene sequence 
GGGGACGTGGTGCAGCCTGGTTTAGCATGCCGGTCTGTCACACCGGTGGTCGCGGGTTCA
AATCCCGTCGTCCCCGCCA
Downstream region at tRNA end position 
aagggagggc
Secondary structure (Cloverleaf model)
>C151001632	Asp	GTC
                   c      GCCA aagggagggc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      + | | | |     A
  T         C G T G       G C G G G     C
  G         | | | +                 T T
  G         G C A T
    T T T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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