The detailed information of tRNA gene sequence


Sequence ID>C151001653
Genome IDAP014509
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga caldifontis AZM44c09 [AP014509]
Start position on genome 1541561
End posion on genome 1541485
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaacgtggt
tRNA gene sequence 
CGGGGCGTAGCGCAGACGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGTCGCTGGTTCAAG
TCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
attttttgta
Secondary structure (Cloverleaf model)
>C151001653	Pro	TGG
                   t      ACCA attttttgta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
      A G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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