The detailed information of tRNA gene sequence


Sequence ID>C151001654
Genome IDAP014509
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga caldifontis AZM44c09 [AP014509]
Start position on genome 1540347
End posion on genome 1540258
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatatgagct
tRNA gene sequence 
GGAGGCGTGTCCGAACTGGCTAAGGAGCCGGTCTTGAAAACCGGTGGGGGCGAAGCCCCC
TTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gaacccgtac
Secondary structure (Cloverleaf model)
>C151001654	Ser	TGA
                   t      GCCA gaacccgtac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGGGGCGAAGCCCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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