The detailed information of tRNA gene sequence


Sequence ID>C151001677
Genome IDAP014510
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga profunda AZM34c06 [AP014510]
Start position on genome 392799
End posion on genome 392875
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtgagacgc
tRNA gene sequence 
AGGGCCGTAGCTCAATTGGGTAGAGCACCGGTCTCCAAAATCGGGGGTTGCGGGTTCGAC
TCCTGCCGGCCCTGCCA
Downstream region at tRNA end position 
attttttgta
Secondary structure (Cloverleaf model)
>C151001677	Trp	CCA
                   c      GCCA attttttgta
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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