The detailed information of tRNA gene sequence


Sequence ID>C151001705
Genome IDAP014510
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga profunda AZM34c06 [AP014510]
Start position on genome 1304142
End posion on genome 1304053
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatatcctt
tRNA gene sequence 
GGAGGCGTGTCCGAATTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGTGGTGAAGCCACC
TTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
cttcaatcct
Secondary structure (Cloverleaf model)
>C151001705	Ser	TGA
                   t      GCCA cttcaatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGTGGTGAAGCCACCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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