The detailed information of tRNA gene sequence


Sequence ID>SRA1017139
Genome IDSRR035082.87127
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 90
End posion on genome 161
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atattataat
tRNA gene sequence 
GCAGTCATAGCCAAGTGGTAAGGCGAAGCATTGCAAATGCTTTAATCGAAGGTTCAATTC
CTTTTGACTGCTtta
Downstream region at tRNA end position 
atctttataa
Secondary structure (Cloverleaf model)
>SRA1017139	Cys	GCA
                   t      Ttta atctttataa
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T T
                    T     T T T C C     A
        G A        A      + | | | |     A
      T     A C C G       G A A G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TAATC
                    A - T
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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