The detailed information of tRNA gene sequence


Sequence ID>C151002088
Genome IDAP014568
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesSerpentinimonas raichei A1 [AP014568]
Start position on genome 1099629
End posion on genome 1099718
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taggctaccc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAACCCCCA
CCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gaccagaaaa
Secondary structure (Cloverleaf model)
>C151002088	Ser	GGA
                   c      GCCA gaccagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAACCCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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