The detailed information of tRNA gene sequence


Sequence ID>SRA1017153
Genome IDSRR035082.89997
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 421
End posion on genome 348
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaacaaac
tRNA gene sequence 
GGGAGCGTGGTGTAATCAGGTATCATGTCGGATTCCAGACCCGAAGAGTGTGGGTTCGAA
TCCCATCGTTCCCCatt
Downstream region at tRNA end position 
tattttttta
Secondary structure (Cloverleaf model)
>SRA1017153	Trp	CCA
                   c      Catt tattttttta
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T A A        G      + | | | |     G
    C       T G T G       G T G G G     C
    A         | | +                 T T
    G       T C A T
      G T A        G     AGAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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