The detailed information of tRNA gene sequence


Sequence ID>SRA1017270
Genome IDSRR035082.108506
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 175
End posion on genome 249
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagggcattt
tRNA gene sequence 
GAGTCGATAGTGTTAATGGTAGCACGTTAGTCTCCAAAACTAAAAGTGAGGGTTCAAATC
CTTCTCGGCTTGCCA
Downstream region at tRNA end position 
tttaaaagta
Secondary structure (Cloverleaf model)
>SRA1017270	Trp	CCA
                   t      GCCA tttaaaagta
                     G + T
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C T T C C     A
      A A T        A      | | + | |     A
    T       T G T G       G A G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGT
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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