The detailed information of tRNA gene sequence


Sequence ID>C151003506
Genome IDCP002581
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia plantarii PG1 [CP002580, CP002581]
Start position on genome 2286226
End posion on genome 2286131
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcacgctcgc
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTGCGGCCAGGCTTCAAACCTGGTTGGGGACGTCAATCG
TTCCCGGGTTGGTTCGACTCCAGCTGCCTTCCGCCA
Downstream region at tRNA end position 
ctcaaggctt
Secondary structure (Cloverleaf model)
>C151003506	SeC	TCA
                   c      GCCA ctcaaggctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G A C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T T G G     C
    G       | + | |                 T T
    T       T G C G
      G G          G     TTGGGGACGTCAATCGTTCCCGG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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