The detailed information of tRNA gene sequence


Sequence ID>C151003679
Genome IDCP002809
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. SHO [CP002809]
Start position on genome 21092
End posion on genome 21184
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagctctta
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTCGAAGGCGCACCGCTGGAAACGGTGTGAAGGGTGATGAGCC
CTTCCGCGGGTTCGAATCCCGCCCCATCCGCCA
Downstream region at tRNA end position 
cttgaaactt
Secondary structure (Cloverleaf model)
>C151003679	Ser	GGA
                   a      GCCA cttgaaactt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAAGGGTGATGAGCCCTTCC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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