The detailed information of tRNA gene sequence


Sequence ID>C151005217
Genome IDCP004021
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Liberibacter africanus PTSAPSY [CP004021]
Start position on genome 1116507
End posion on genome 1116432
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttgtcgatgg
tRNA gene sequence 
GCCCTTGTAGCTCAGCAGGTAGAGCGCCTGATTTGTAATCAGGAGGTAACGGGTTCGAGT
CCTGTCGGGGGCACCA
Downstream region at tRNA end position 
gaaaaagttt
Secondary structure (Cloverleaf model)
>C151005217	Thr	TGT
                   g      ACCA gaaaaagttt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T G
                    T     T G T C C     A
      C G A        A      | | + | |     G
    A       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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