The detailed information of tRNA gene sequence


Sequence ID>SRA1017540
Genome IDSRR035082.158897
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 114
End posion on genome 188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataaaattac
tRNA gene sequence 
CGCGGGGTAGAGCAGTATGGTCAGCTCGAATGGCTCATAACCATTAGGTCGGAGGTTCGA
ATCCTTCTCCCGCTAtta
Downstream region at tRNA end position 
aggtcttttg
Secondary structure (Cloverleaf model)
>SRA1017540	Met	CAT
                   c      Atta aggtcttttg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T T C C     A
    A T G A        A      | + | | |     G
  T         C G A G       G G A G G     C
  G         | | | |                 T T
  G         G C T C
    T C A          G     AGGTC
                    A - T
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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