The detailed information of tRNA gene sequence


Sequence ID>SRA1017556
Genome IDSRR035082.161382
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 224
End posion on genome 140
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccgcataT
tRNA gene sequence 
GATGTGATGGTAGAGTGGTTTAATACACCAGGTTGCTAACTTGGAGGGCGAAAGTTCCGC
AGGTTCAAATCCTGCTCACATCGTag
Downstream region at tRNA end position 
gatgctgtgg
Secondary structure (Cloverleaf model)
>SRA1017556	Ser	GCT
                   T      GTag gatgctgtgg
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    G       G A T G       G C A G G     C
    G         | | |                 T T
    T       A T A C
      T T A        A     AGGGCGAAAGTTCC
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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