The detailed information of tRNA gene sequence


Sequence ID>SRA1017593
Genome IDSRR035082.164415
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 258
End posion on genome 168
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgctgaat
tRNA gene sequence 
GGAGAGATGGGCGAGTGGCTTATGCCAGCAGTTTGCTAAACTGTAGAATCTGAGATATTG
GTTCCGCAGGTTCGAATCCTGCTCTCTCCGCtt
Downstream region at tRNA end position 
taaaggaaat
Secondary structure (Cloverleaf model)
>SRA1017593	Ser	GCT
                   t      GCtt taaaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C G G       G C A G G     C
    G       + | | |                 T T
    C       T G C C
      T T A        A     AGAATCTGAGATATTGGTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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