The detailed information of tRNA gene sequence


Sequence ID>C151006572
Genome IDCP004388
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira xiamenensis M-5 = DSM 17429 [CP004388]
Start position on genome 1727536
End posion on genome 1727611
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacgcgctgc
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACTGCCCTTTCACGGCGGCAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
ctcgttaaca
Secondary structure (Cloverleaf model)
>C151006572	Glu	TTC
                   c      GCCA ctcgttaaca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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