The detailed information of tRNA gene sequence


Sequence ID>C151006802
Genome IDCP004403
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesendosymbiont of Acanthamoeba sp. UWC8 [CP004403]
Start position on genome 1209741
End posion on genome 1209651
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatgaattc
tRNA gene sequence 
GGAAGGATGGCCGAGCGGTTGAAGGCGCACGCCTGGAACGCGTGTATATCTGAATAAGGT
ATCAAGGGTTCGAATCCCTTTCCTTCCGCCA
Downstream region at tRNA end position 
ttttaaaatt
Secondary structure (Cloverleaf model)
>C151006802	Ser	GGA
                   c      GCCA ttttaaaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATATCTGAATAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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