The detailed information of tRNA gene sequence


Sequence ID>SRA1017899
Genome IDSRR035082.211772
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 3
End posion on genome 92
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GGAAGGATGTCAGAGTGGCCGAATGAGATAGTTTGCTAAACTATTGTACGAGCAATCGTA
CCAGAGGTTCGAATCCTCTTTCTTCCGCCA
Downstream region at tRNA end position 
attaaaaata
Secondary structure (Cloverleaf model)
>SRA1017899	Ser	GCT
                   a      GCCA attaaaaata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     A - T          T A
                    T     T C T C C     A
      T G A        G      | | | | |     G
    G       G A C T       A G A G G     C
    G         | | |                 T T
    C       A T G A
      C G A        G     TGTACGAGCAATCGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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