The detailed information of tRNA gene sequence


Sequence ID>SRA1017931
Genome IDSRR035082.215826
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 20
End posion on genome 111
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatttaatat
tRNA gene sequence 
GGAAGGTTGGCTGAGTGGCCGAAAGCACTGGTTTGCTAAATCAGCNCAGTTTGAAAAGAC
TGCCGTGGGTTCGACTCCCACATCTTCCGCCA
Downstream region at tRNA end position 
ttttaacaag
Secondary structure (Cloverleaf model)
>SRA1017931	Ser	GCT
                   t      GCCA ttttaacaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     T - A          T C
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CNCAGTTTGAAAAGACTGCC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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