The detailed information of tRNA gene sequence


Sequence ID>SRA1018143
Genome IDSRR035082.245480
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 203
End posion on genome 292
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttggcttT
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGCTTAAGGAGCTGGTTTCGAAAACCAGTGTACCTTATTAAGGT
ACCGCGGGTTCGAATCCCGCCTTCTCCGGtt
Downstream region at tRNA end position 
ttttatttga
Secondary structure (Cloverleaf model)
>SRA1018143	Ser	CGA
                   T      GGtt ttttatttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTACCTTATTAAGGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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