The detailed information of tRNA gene sequence


Sequence ID>SRA1018221
Genome IDSRR035082.257616
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 169
End posion on genome 261
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaaataat
tRNA gene sequence 
GGAAGTGTACTCAAACTGGATTAAGAGGCTAGTCTTGAAAACTAGTAGGTCAGTTAATAG
CTGGTGTGTGGGTTCGAACCCCACCGCTTCCTCtc
Downstream region at tRNA end position 
taaatgtctg
Secondary structure (Cloverleaf model)
>SRA1018221	Ser	TGA
                   t      TCtc taaatgtctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          C A
                    T     C A C C C     A
    T C A A        A      | | | | |     G
  G         A C T C       G T G G G     C
  G           | | |                 T T
  A         A G A G
    T T A          G     TAGGTCAGTTAATAGCTGGTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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