The detailed information of tRNA gene sequence


Sequence ID>C151015100
Genome IDCP006944
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMannheimia varigena USDA-ARS-USMARC-1312 [CP006944]
Start position on genome 1478030
End posion on genome 1477941
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttattgattc
tRNA gene sequence 
GGTGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGCGTGTATACGGGAAACTGTA
TCGGGGGTTCGAATCCCCCTCTCACCGCCA
Downstream region at tRNA end position 
ttcaattaga
Secondary structure (Cloverleaf model)
>C151015100	Ser	GGA
                   c      GCCA ttcaattaga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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